Excellent diagnostic characteristics for ultrafast gene profiling of DEFA1-IL1B-LTF in detection of prosthetic joint infections
dc.contributor.author | Fillerová, Regina | |
dc.contributor.author | Gallo, Jiří | |
dc.contributor.author | Radvanský, Martin | |
dc.contributor.author | Kraiczová, Veronika | |
dc.contributor.author | Kudělka, Miloš | |
dc.contributor.author | Kriegová, Eva | |
dc.date.accessioned | 2017-09-11T07:20:10Z | |
dc.date.available | 2017-09-11T07:20:10Z | |
dc.date.issued | 2017 | |
dc.identifier.citation | Journal of Clinical Microbiology. 2017, vol. 55, issue 9, p. 2686-2697. | cs |
dc.identifier.issn | 0095-1137 | |
dc.identifier.issn | 1098-660X | |
dc.identifier.uri | http://hdl.handle.net/10084/120212 | |
dc.description.abstract | The timely and exact diagnosis of prosthetic joint infection (PJI) is crucial for surgical decision-making. Intraoperatively, delivery of the result within an hour is required. Alpha-defensin lateral immunoassay of joint fluid (JF) is precise for the intraoperative exclusion of PJI; however, for patients with a limited amount of JF and/or in cases where the JF is bloody, this test is unhelpful. Important information is hidden in periprosthetic tissues that may much better reflect the current status of implant pathology. We therefore investigated the utility of the gene expression patterns of 12 candidate genes (TLR1, -2, -4, -6, and 10, DEFA1, LTF, IL1B, BPI, CRP, IFNG, and DEFB4A) previously associated with infection for detection of PJI in periprosthetic tissues of patients with total joint arthroplasty (TJA) (n = 76) reoperated for PJI (n = 38) or aseptic failure (n = 38), using the ultrafast quantitative reverse transcription-PCR (RT-PCR) Xxpress system (BJS Biotechnologies Ltd.). Advanced data-mining algorithms were applied for data analysis. For PJI, we detected elevated mRNA expression levels of DEFA1 (P < 0.0001), IL1B (P < 0.0001), LTF (P < 0.0001), TLR1 (P = 0.02), and BPI (P = 0.01) in comparison to those in tissues from aseptic cases. A feature selection algorithm revealed that the DEFA1-IL1B-LTF pattern was the most appropriate for detection/exclusion of PJI, achieving 94.5% sensitivity and 95.7% specificity, with likelihood ratios (LRs) for positive and negative results of 16.3 and 0.06, respectively. Taken together, the results show that DEFA1-IL1B-LTF gene expression detection by use of ultrafast qRT-PCR linked to an electronic calculator allows detection of patients with a high probability of PJI within 45 min after sampling. Further testing on a larger cohort of patients is needed. | cs |
dc.format.extent | 2059507 bytes | |
dc.format.mimetype | application/pdf | |
dc.language.iso | en | cs |
dc.publisher | American Society for Microbiology | cs |
dc.relation.ispartofseries | Journal of Clinical Microbiology | cs |
dc.relation.uri | http://dx.doi.org/10.1128/JCM.00558-17 | cs |
dc.rights | Copyright © 2017 Fillerova et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license. | cs |
dc.rights.uri | http://creativecommons.org/licenses/by/4.0/ | cs |
dc.subject | prosthetic joint infection | cs |
dc.subject | gene expression | cs |
dc.subject | pseudosynovial tissues | cs |
dc.subject | diagnostics | cs |
dc.subject | intraoperative test | cs |
dc.title | Excellent diagnostic characteristics for ultrafast gene profiling of DEFA1-IL1B-LTF in detection of prosthetic joint infections | cs |
dc.type | article | cs |
dc.identifier.doi | 10.1128/JCM.00558-17 | |
dc.rights.access | openAccess | |
dc.type.version | publishedVersion | cs |
dc.type.status | Peer-reviewed | cs |
dc.description.source | Web of Science | cs |
dc.description.volume | 55 | cs |
dc.description.issue | 9 | cs |
dc.description.lastpage | 2697 | cs |
dc.description.firstpage | 2686 | cs |
dc.identifier.wos | 000408223700016 |
Files in this item
This item appears in the following Collection(s)
-
Publikační činnost VŠB-TUO ve Web of Science / Publications of VŠB-TUO in Web of Science [7798]
Kolekce obsahuje bibliografické záznamy článků akademických pracovníků VŠB-TUO publikovaných v časopisech indexovaných ve Web of Science od roku 1990 po současnost. -
Publikační činnost Katedry informatiky / Publications of Department of Computer Science (460) [562]
Kolekce obsahuje bibliografické záznamy publikační činnosti (článků) akademických pracovníků Katedry informatiky (460) v časopisech a v Lecture Notes in Computer Science registrovaných ve Web of Science od roku 2003 po současnost. -
OpenAIRE [5085]
Kolekce určená pro sklízení infrastrukturou OpenAIRE; obsahuje otevřeně přístupné publikace, případně další publikace, které jsou výsledkem projektů rámcových programů Evropské komise (7. RP, H2020, Horizon Europe). -
Články z časopisů s impakt faktorem / Articles from Impact Factor Journals [6377]
Články z časopisů (od roku 2008), které v době vydání článku měly impakt faktor.